INTRODUCTION TO BIOINFORMATICS

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Introduction To Bioinformatics

Author : Stephen A. Krawetz
ISBN : 1588290646
Genre : Computers
File Size : 27.35 MB
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A comprehensible introduction to the key biological, mathematical, statistical, and computer concepts and tools behind bioinformatics. For physical scientists, the book provides a sound biological framework for understanding the questions a life scientist would ask in the context of currently available computational tools. For life scientists, a complete discussion of the UNIX operating system offers biologists graphical-user-interface comfort in a command-line environment, plus an understanding of the installation and management of UNIX-based software tools. In the applications sections the book provides a common meeting ground for life and physical scientists. Here they will find examples of the management and analysis of DNA sequencing projects, the modeling of DNA as a statistical series of patterns, various methods of pattern discovery, protein visualization, and the use of multiple sequence alignment to infer both functional and structural biological relationships. An accompanying CD contains several full and limited trial-versions of the programs discussed in the text, as well as a complete set of illustrations from each chapter suitable for lectures and presentations.
Category: Computers

Introduction To Bioinformatics

Author : Teresa K. Attwood
ISBN : STANFORD:36105110143414
Genre : Science
File Size : 50.60 MB
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Bioinformatics, the application of computers in biological sciences and especially analysis of biological sequence data, is becoming an essential tool in molecular biology as genome projects generate vast quantities of data. This text provides an introduction to the subject for undergraduates (final year), focussing on two key areas, genojmics and protein sequence analysis. It provides an overview of primary, composite and secondary databases, and gives a brief introduction to the Internet and the World Wide Web.
Category: Science

Introduction To Bioinformatics

Author : Anna Tramontano
ISBN : 9781351989411
Genre : Science
File Size : 64.40 MB
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Guiding readers from the elucidation and analysis of a genomic sequence to the prediction of a protein structure and the identification of the molecular function, Introduction to Bioinformatics describes the rationale and limitations of the bioinformatics methods and tools that can help solve biological problems. Requiring only a limited mathematical and statistical background, the book shows how to efficiently apply these approaches to biological data and evaluate the resulting information. The author, an expert bioinformatics researcher, first addresses the ways of storing and retrieving the enormous amount of biological data produced every day and the methods of decrypting the information encoded by a genome. She then covers the tools that can detect and exploit the evolutionary and functional relationships among biological elements. Subsequent chapters illustrate how to predict the three-dimensional structure of a protein. The book concludes with a discussion of the future of bioinformatics. Even though the future will undoubtedly offer new tools for tackling problems, most of the fundamental aspects of bioinformatics will not change. This resource provides the essential information to understand bioinformatics methods, ultimately facilitating in the solution of biological problems.
Category: Science

An Introduction To Bioinformatics Algorithms

Author : Neil C. Jones
ISBN : 0262101068
Genre : Computers
File Size : 26.2 MB
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Algorithms and Complexity. Molecular Biology Primer. Exhaustive Search. Greedy Algorithms. Dynamic Programming Algorithms. Divide-and-Conquer Algorithms. Graph Algorithms. Combinatorial Pattern Matching. Clustering and Trees. Hidden Markov Models. Randomized Algorithms.
Category: Computers

Introduction To Bioinformatics

Author : Arthur Lesk
ISBN : 9780199651566
Genre : Science
File Size : 75.79 MB
Format : PDF
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Lesk provides an accessible and thorough introduction to a subject which is becoming a fundamental part of biological science today. The text generates an understanding of the biological background of bioinformatics.
Category: Science

Bioinformatics Biocomputing And Perl

Author : Michael Moorhouse
ISBN : 9780470026458
Genre : Medical
File Size : 84.42 MB
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Bioinformatics, Biocomputing and Perl presents a modern introduction to bioinformatics computing skills and practice. Structuring its presentation around four main areas of study, this book covers the skills vital to the day-to-day activities of today’s bioinformatician. Each chapter contains a series of maxims designed to highlight key points and there are exercises to supplement and cement the introduced material. Working with Perl presents an extended tutorial introduction to programming through Perl, the premier programming technology of the bioinformatics community. Even though no previous programming experience is assumed, completing the tutorial equips the reader with the ability to produce powerful custom programs with ease. Working with Data applies the programming skills acquired to processing a variety of bioinformatics data. In addition to advice on working with important data stores such as the Protein DataBank, SWISS-PROT, EMBL and the GenBank, considerable discussion is devoted to using bioinformatics data to populate relational database systems. The popular MySQL database is used in all examples. Working with the Web presents a discussion of the Web-based technologies that allow the bioinformatics researcher to publish both data and applications on the Internet. Working with Applications shifts gear from creating custom programs to using them. The tools described include Clustal-W, EMBOSS, STRIDE, BLAST and Xmgrace. An introduction to the important Bioperl Project concludes this chapter and rounds off the book.
Category: Medical

Introduction To Bioinformatics

Author : Arthur M. Lesk
ISBN : 1628708522
Genre : Bioinformatics
File Size : 30.13 MB
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Lesk provides an accessible and thorough introduction to a subject which is becoming a fundamental part of biological science today. The text generates an understanding of the biological background of bioinformatics.
Category: Bioinformatics

Beginning Perl For Bioinformatics

Author : James Tisdall
ISBN : 0596550472
Genre : Computers
File Size : 55.75 MB
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With its highly developed capacity to detect patterns in data, Perl has become one of the most popular languages for biological data analysis. But if you're a biologist with little or no programming experience, starting out in Perl can be a challenge. Many biologists have a difficult time learning how to apply the language to bioinformatics. The most popular Perl programming books are often too theoretical and too focused on computer science for a non-programming biologist who needs to solve very specific problems.Beginning Perl for Bioinformatics is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem or class of problems, starting with the simplest and increasing in complexity as the book progresses. Each chapter includes programming exercises and teaches bioinformatics by showing and modifying programs that deal with various kinds of practical biological problems. By the end of the book you'll have a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to take on more advanced bioinformatics programming. Some of the later chapters focus in greater detail on specific bioinformatics topics. This book is suitable for use as a classroom textbook, for self-study, and as a reference.The book covers: Programming basics and working with DNA sequences and strings Debugging your code Simulating gene mutations using random number generators Regular expressions and finding motifs in data Arrays, hashes, and relational databases Regular expressions and restriction maps Using Perl to parse PDB records, annotations in GenBank, and BLAST output
Category: Computers

Text Book Of Bioinformatics

Author : Vinay Sharma
ISBN : 8171339174
Genre : Bioinformatics
File Size : 64.97 MB
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1. Introduction to Bioinformatics 2. Introduction to Computers 3. Introduction to Internet 4. Search Engines: Tools for Web Search 5. Programming Languages 6. Genomics and Proteomics 7. Biological Databases 8. Sequence Analysis 9. Phylogenetic Analysis 10. Microarray Technology: A Boon to Biological Sciences 11. Bioinformatic..s in Drug Discovery: A Brief Overview 12. Genome Sequencing Projects 13. BTIS Network In India Index
Category: Bioinformatics

Introduction To Bioinformatics In Microbiology

Author : Henrik Christensen
ISBN : 9783319992808
Genre : Science
File Size : 34.24 MB
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This textbook introduces to the basic concepts of bioinformatics and enhances students’ skills in using software and tools relevant for investigations in microbiology. The most relevant methods to analyze data are shown and readers are introduced on how to draw valid conclusions based on the results obtained. Software and servers which are free to use on the internet are presented and more advanced stand-alone programs are suggested as a second option. Exercises and training quizzes are provided at the end of each chapter to facilitate learning. The book targets Ph. D. students and advanced undergraduates in microbiology, biotechnology, and (veterinary) medicine with little to basic knowledge in bioinformatics.
Category: Science